Unofficial CRUX PortDB

Collection:ppetrov
Ports:88
Maintainer:slackalaxy at gmail dot com
Type:httpup (sync file)

Port: Version: Description: Health: Port download command:
aiksaurus 1.2.1 CLI/GTK thesaurus OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#aiksaurus aiksaurus
aliview 1.30 Alignment viewer and editor OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#aliview aliview
argtable 2.13 ANSI C library for parsing command line arguments OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#argtable argtable
bluecurve 3.0.0 Bluecurve GTK 2/3/4 theme OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bluecurve bluecurve
bpp-core 2.4.1 Bio++ Core Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-core bpp-core
bpp-phyl 2.4.1 Bio++ Phyl Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-phyl bpp-phyl
bpp-phyl-omics 2.4.1 Bio++ Phyl Omics Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-phyl-omics bpp-phyl-omics
bpp-popgen 2.4.1 Bio++ PopGen Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-popgen bpp-popgen
bpp-seq 2.4.1 Bio++ Seq Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-seq bpp-seq
bpp-seq-omics 2.4.1 Bio++ Seq Omics Library. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp-seq-omics bpp-seq-omics
bpp1-numcalc 1.8.0 Bio++ 1 NumCalc Library OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp1-numcalc bpp1-numcalc
bpp1-phyl 1.9.0 Bio++ 1 Phyl Library OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp1-phyl bpp1-phyl
bpp1-seq 1.7.0 Bio++ 1 Seq Library OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp1-seq bpp1-seq
bpp1-utils 1.5.0 Bio++ 1 Utils Library OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bpp1-utils bpp1-utils
bppsuite 2.4.1 Bio++ Suite OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#bppsuite bppsuite
caps-coev 2.0 Coevolution Analysis using Protein Sequences OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#caps-coev caps-coev
clustalo 1.2.4 Clustal Omega OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#clustalo clustalo
datamash 1.9 Basic numeric, textual and statistical operations OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#datamash datamash
exonerate 2.4.0 Exonerate: a generic tool for sequence alignment OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#exonerate exonerate
fonts-apple-sf wwdc25 Apple San Francisco fonts OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#fonts-apple-sf fonts-apple-sf
g3data 47a1e64 A tool for extracting data from graphs OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#g3data g3data
gbgoffice 1.4 Bgoffice dictionary frontend OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#gbgoffice gbgoffice
gblocks 0.91b Select blocks of evolutionarily conserved sites OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#gblocks gblocks
gcc5 5.5.0 The GNU Compiler Collection version 5.5.0 OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#gcc5 gcc5
gnumeric 1.12.59 Gnumeric: an open-source spreadsheet program OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#gnumeric gnumeric
goffice 0.10.59 A glib/gtk set of document centric objects and ut… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#goffice goffice
gtkmm2 2.24.5 C++ interface to GTK2. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#gtkmm2 gtkmm2
hdf5 1.14.6 Hierarchical Data Format 5 OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#hdf5 hdf5
hexchat 2.16.2 GTK+ based IRC client OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#hexchat hexchat
hyphy 2.5.74 Hypothesis Testing using Phylogenies OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#hyphy hyphy
kdsingleapplication 1.2.0 KDAB's helper class for single-instance policy ap… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#kdsingleapplication kdsingleapplication
lalnview 3.0 Visualize local alignments (includes SIM) OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#lalnview lalnview
libgsf 1.14.53 GNOME Structured File Library OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#libgsf libgsf
llvm14 14.0.6 LLVM14 compiler backend OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#llvm14 llvm14
mafft 7.526 A multiple sequence alignment program OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#mafft mafft
masterpdfeditor4 4.3.89 The best solution for working with PDF files in L… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#masterpdfeditor4 masterpdfeditor4
medit 1.2.92 GTK+ text editor OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#medit medit
meld 3.23.0 A visual diff and merge tool OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#meld meld
mtpaint 7cae5d6 simple GTK+ painting program OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#mtpaint mtpaint
mumsa 1.0 Assessment of the quality of multiple sequence al… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#mumsa mumsa
muscle 3.8.1551 MUltiple Sequence Comparison by Log-Expectation OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#muscle muscle
muscle5 5.3 MUSCLE 5: Next-generation MUSCLE OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#muscle5 muscle5
ncbi-blast-plus 2.17.0 BLAST+ Command Line Applications OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#ncbi-blast-plus ncbi-blast-plus
ncbi-datasets 18.5.0 NCBI Datasets command-line tools OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#ncbi-datasets ncbi-datasets
ncbi-edirect 24.4.20250710 Command line access to Entrez databases OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#ncbi-edirect ncbi-edirect
openvpn 2.6.14 A Secure tunneling daemon OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#openvpn openvpn
pal2nal 14.1 Create a codon-based DNA alignment OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#pal2nal pal2nal
paml 4.10.6 PAML: Phylogenetic Analysis by Maximum Likelihood WARN httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#paml paml
pdflib-lite 7.0.5p3 A library for generating PDF files OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#pdflib-lite pdflib-lite
phyml 3.3.20250515 Phylogenetic estimation using Maximum Likelihood OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#phyml phyml
polar-cursor-themes 1.4 Polar cursor themes OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#polar-cursor-themes polar-cursor-themes
prank 250331 A probabilistic multiple alignment program OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#prank prank
python3-beniget 0.4.2.post1 A collection of Compile-time analyse on Python Ab… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-beniget python3-beniget
python3-gast 0.6.0 A generic AST to represent Python3's Abstract Syn… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-gast python3-gast
python3-joblib 1.5.1 Python functions as pipeline jobs OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-joblib python3-joblib
python3-llvmlite 0.43.0 A Lightweight LLVM Python Binding for Writing JIT… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-llvmlite python3-llvmlite
python3-numba 0.61.2 Translates Python functions to optimized machine … OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-numba python3-numba
python3-pooch 1.8.2 A friend to fetch your data files OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-pooch python3-pooch
python3-pybind11 2.13.6 Seamless operability between C++11 and Python OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-pybind11 python3-pybind11
python3-pynndescent 0.5.13 Nearest neighbor descent for approximate nearest … OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-pynndescent python3-pynndescent
python3-pythran 0.18.0 A compiler for a Python subset OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-pythran python3-pythran
python3-scikit-learn 1.7.0 A Python module for machine learning OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-scikit-learn python3-scikit-learn
python3-scipy 1.16.0 Open-source software for mathematics, science, an… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-scipy python3-scipy
python3-threadpoolctl 3.6.0 Limit the number of threads OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-threadpoolctl python3-threadpoolctl
python3-tqdm 4.67.1 Fast, Extensible Progress Meter OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-tqdm python3-tqdm
python3-umap 0.5.8 Uniform Manifold Approximation and Projection in … OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#python3-umap python3-umap
qt5ct 1.9 Qt5 Configuration Utility OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#qt5ct qt5ct
qt6ct 0.10 Qt6 configuration utility OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#qt6ct qt6ct
qt6gtk2 0.5 GTK+2.0 integration plugins for Qt6 OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#qt6gtk2 qt6gtk2
rstudio-desktop 2025.05.1+513 RStudio is an integrated development environment … OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#rstudio-desktop rstudio-desktop
seaview 5.1 Multiple sequence alignment and phylogeny GUI OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#seaview seaview
seqkit 2.10.0 Atoolkit for FASTA/Q file manipulation OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#seqkit seqkit
smplayer 25.6.0 MPlayer/MPV frontend OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#smplayer smplayer
squizz 0.99d A sequence/alignment format checker and converter OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#squizz squizz
sshpass 1.10 Non-interactive ssh password auth files OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#sshpass sshpass
strawberry 1.2.11 Strawberry music player OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#strawberry strawberry
tcl 8.6.16 The Tcl scripting language. OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#tcl tcl
tk 8.6.16 A GUI toolkit for TCL OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#tk tk
treebest 347fa82 Tree Building guidEd by Species Tree OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#treebest treebest
treerecs 1.2 Treerecs: a tree reconciliation tool OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#treerecs treerecs
ucsf-chimerax 1.10.1 The next-generation molecular visualization progr… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#ucsf-chimerax ucsf-chimerax
viber 24.9.0.3 Viber for PC OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#viber viber
vscodium 1.102.35058 Free/Libre Open Source Software Binaries of VS Co… INFO httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#vscodium vscodium
wps-office 11.1.0.11723.XA WPS Office for Linux INFO httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#wps-office wps-office
xscreensaver 6.10.1 XScreenSaver patched to work with electricsheep a… INFO httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#xscreensaver xscreensaver
xsimd 13.2.0 X Single Instruction, Multiple Data OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#xsimd xsimd
yt-dlp 2025.07.21 CLI program to access YouTub and other data conte… OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#yt-dlp yt-dlp
zoom-linux 6.5.7.3298 Online conference OK httpup sync https://raw.githubusercontent.com/slackalaxy/crux-ports/main/ppetrov/#zoom-linux zoom-linux